BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D11LP1|AL428216
(1029 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig284 1564 0.0
>3x_Contig284
Length = 1982
Score = 1564 bits (788), Expect = 0.0
Identities = 788/788 (100%)
Strand = Plus / Plus
Query: 1 gatccataatctatgcaggaattccagccaccgtgatattgatatgtcctctactgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 gatccataatctatgcaggaattccagccaccgtgatattgatatgtcctctactgtaca 1241
Query: 61 agctactggatatctacgaataagttaaaacaatattaacaagttttgtgtatcaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 agctactggatatctacgaataagttaaaacaatattaacaagttttgtgtatcaaagga 1301
Query: 121 gtgatttatagtatatgtttataaagagctctttactatatctaggatatcattataaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 gtgatttatagtatatgtttataaagagctctttactatatctaggatatcattataaaa 1361
Query: 181 ggcgaattaatgaaggggctgatagatggagacgaaattgaaacgatgcacacctgcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 ggcgaattaatgaaggggctgatagatggagacgaaattgaaacgatgcacacctgcatg 1421
Query: 241 caactgagttggaaaacctccgcctaaatctgaaaaagtaaaccagtgacttacccataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 caactgagttggaaaacctccgcctaaatctgaaaaagtaaaccagtgacttacccataa 1481
Query: 301 gtcataattatttgatctgaaatccagttcagatcaaccgagtgtatatacagctagtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 gtcataattatttgatctgaaatccagttcagatcaaccgagtgtatatacagctagtag 1541
Query: 361 ataaaatggtacgaggtctggatcagacgactgacatctataactgaggagccccatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 ataaaatggtacgaggtctggatcagacgactgacatctataactgaggagccccatttg 1601
Query: 421 gataagccaattgtctcttaatggctaactttgcgctcaaaggaccgtatttggttgcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 gataagccaattgtctcttaatggctaactttgcgctcaaaggaccgtatttggttgcta 1661
Query: 481 cttctctgtattctttgaacgatttaaacgagttaccagcgttaaacaaagccgtattgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 cttctctgtattctttgaacgatttaaacgagttaccagcgttaaacaaagccgtattgg 1721
Query: 541 ccttggttgtggctactttgcttggaatagacacagaagcgatggtagctacagaaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 ccttggttgtggctactttgcttggaatagacacagaagcgatggtagctacagaaggaa 1781
Query: 601 ttgctttggtaactgtacgtgaaactttggctgagtaattagcgaacattgttattaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1782 ttgctttggtaactgtacgtgaaactttggctgagtaattagcgaacattgttattaata 1841
Query: 661 tgagagatgattgtcagatggatatcttggttgtcataataacagctgaaaccttaacac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 tgagagatgattgtcagatggatatcttggttgtcataataacagctgaaaccttaacac 1901
Query: 721 atatatatatcatcaaaaagaaggaataataggttgatgagaacaatacatgattctgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 atatatatatcatcaaaaagaaggaataataggttgatgagaacaatacatgattctgtc 1961
Query: 781 ttccttat 788
||||||||
Sbjct: 1962 ttccttat 1969
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6908
Number of Sequences: 1807
Number of extensions: 6908
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 1029
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1013
effective length of database: 10,329,639
effective search space: 10463924307
effective search space used: 10463924307
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)